IL_6OLG_275

3D structure

PDB id

6OLG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UUU*AGA

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OLG_275 not in the Motif Atlas

Homologous match to IL_8P9A_275

Geometric discrepancy: 0.0658

The information below is about IL_8P9A_275

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLG|1|A2|U|1842
6OLG|1|A2|U|1843
6OLG|1|A2|U|1844
*
6OLG|1|A2|A|1852
6OLG|1|A2|G|1853
6OLG|1|A2|A|1854

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain A4

5S ribosomal RNA; 5S rRNA

Chain AI

60S ribosomal protein L10

Chain Ab

60S ribosomal protein L29