IL_6OLI_040

3D structure

PDB id

6OLI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CAAUACAG*CCUGUAAUUG

Length

18 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLI|1|S2|C|527
6OLI|1|S2|A|528
6OLI|1|S2|A|529
6OLI|1|S2|U|530
6OLI|1|S2|A|531
6OLI|1|S2|C|532
6OLI|1|S2|A|533
6OLI|1|S2|G|534
*
6OLI|1|S2|C|549
6OLI|1|S2|C|550
6OLI|1|S2|U|551
6OLI|1|S2|G|552
6OLI|1|S2|U|553
6OLI|1|S2|A|554
6OLI|1|S2|A|555
6OLI|1|S2|U|556
6OLI|1|S2|U|557
6OLI|1|S2|G|558

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SJ

40S ribosomal protein S9

Chain Se

40S ribosomal protein S30