IL_6OLI_118

3D structure

PDB id

6OLI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGUC*GCUAC

Length

9 nucleotides

Bulged bases

6OLI|1|t|A|1286

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLI|1|t|G|437
6OLI|1|t|G|438
6OLI|1|t|U|439
6OLI|1|t|C|440
*
6OLI|1|t|G|1283
6OLI|1|t|C|1284
6OLI|1|t|U|1285
6OLI|1|t|A|1286
6OLI|1|t|C|1287

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain D

5.8S ribosomal RNA; 5.8S rRNA

Chain f

60S ribosomal protein L32

Chain g

60S ribosomal protein L35a