IL_6OLI_127

3D structure

PDB id

6OLI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGCCG*CCGGCGAC

Length

13 nucleotides

Bulged bases

6OLI|1|t|C|660

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLI|1|t|G|481
6OLI|1|t|G|482
6OLI|1|t|C|483
6OLI|1|t|C|484
6OLI|1|t|G|485
*
6OLI|1|t|C|656
6OLI|1|t|C|657
6OLI|1|t|G|658
6OLI|1|t|G|659
6OLI|1|t|C|660
6OLI|1|t|G|661
6OLI|1|t|A|662
6OLI|1|t|C|663

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain C

60S ribosomal protein L4

Chain r

60S ribosomal protein L28