IL_6OLI_139

3D structure

PDB id

6OLI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGAAGGUGG*UGUUACAGCC

Length

19 nucleotides

Bulged bases

6OLI|1|t|A|737

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLI|1|t|G|735
6OLI|1|t|G|736
6OLI|1|t|A|737
6OLI|1|t|A|738
6OLI|1|t|G|739
6OLI|1|t|G|740
6OLI|1|t|U|741
6OLI|1|t|G|742
6OLI|1|t|G|743
*
6OLI|1|t|U|898
6OLI|1|t|G|899
6OLI|1|t|U|900
6OLI|1|t|U|901
6OLI|1|t|A|902
6OLI|1|t|C|903
6OLI|1|t|A|904
6OLI|1|t|G|905
6OLI|1|t|C|906
6OLI|1|t|C|907

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain N

60S ribosomal protein L14

Chain T

60S ribosomal protein L18a