IL_6OLI_140

3D structure

PDB id

6OLI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGCCACCCC*GGGGGGC

Length

16 nucleotides

Bulged bases

6OLI|1|t|C|1063

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLI|1|t|G|1057
6OLI|1|t|G|1058
6OLI|1|t|C|1059
6OLI|1|t|C|1060
6OLI|1|t|A|1061
6OLI|1|t|C|1062
6OLI|1|t|C|1063
6OLI|1|t|C|1064
6OLI|1|t|C|1065
*
6OLI|1|t|G|1200
6OLI|1|t|G|1201
6OLI|1|t|G|1202
6OLI|1|t|G|1216
6OLI|1|t|G|1217
6OLI|1|t|G|1218
6OLI|1|t|C|1219

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain C

60S ribosomal protein L4

Chain G

60S ribosomal protein L6

Chain H

60S ribosomal protein L7

Chain c

60S ribosomal protein L29