IL_6OLI_156
3D structure
- PDB id
- 6OLI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CGAAG*UGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLI_156 not in the Motif Atlas
- Geometric match to IL_4WF9_024
- Geometric discrepancy: 0.108
- The information below is about IL_4WF9_024
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_15190.2
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 24
Unit IDs
6OLI|1|t|C|1533
6OLI|1|t|G|1534
6OLI|1|t|A|1535
6OLI|1|t|A|1536
6OLI|1|t|G|1537
*
6OLI|1|t|U|1554
6OLI|1|t|G|1555
6OLI|1|t|G|1556
6OLI|1|t|A|1557
6OLI|1|t|G|1558
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain A
- 60S ribosomal protein L8
- Chain S
- 60S ribosomal protein L19
- Chain q
- 60S ribosomal protein L37a
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