IL_6OLI_174
3D structure
- PDB id
- 6OLI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CGCCCGAU*GG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLI_174 not in the Motif Atlas
- Geometric match to IL_7RQB_037
- Geometric discrepancy: 0.1462
- The information below is about IL_7RQB_037
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_15861.7
- Basepair signature
- cWW-L-cWW-L-L-R-cSH
- Number of instances in this motif group
- 12
Unit IDs
6OLI|1|t|C|1892
6OLI|1|t|G|1893
6OLI|1|t|C|1894
6OLI|1|t|C|1895
6OLI|1|t|C|1896
6OLI|1|t|G|1897
6OLI|1|t|A|1898
6OLI|1|t|U|1899
*
6OLI|1|t|G|2045
6OLI|1|t|G|2046
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain H
- 60S ribosomal protein L7
- Chain P
- 60S ribosomal protein L13a
- Chain T
- 60S ribosomal protein L18a
- Chain g
- 60S ribosomal protein L35a
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