IL_6OLI_189
3D structure
- PDB id
- 6OLI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GGUU*AC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLI_189 not in the Motif Atlas
- Geometric match to IL_4V9F_050
- Geometric discrepancy: 0.1338
- The information below is about IL_4V9F_050
- Detailed Annotation
- Major groove platform; stack outside cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_74641.2
- Basepair signature
- cWW-tSH-cWW-L
- Number of instances in this motif group
- 33
Unit IDs
6OLI|1|t|G|2385
6OLI|1|t|G|2386
6OLI|1|t|U|2387
6OLI|1|t|U|2388
*
6OLI|1|t|A|2762
6OLI|1|t|C|2763
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain Y
- 60S ribosomal protein L23a
- Chain h
- 60S ribosomal protein L34
- Chain k
- 60S ribosomal protein L37
- Chain m
- 60S ribosomal protein L39
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