IL_6OLI_190

3D structure

PDB id

6OLI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGAACA*UGAA

Length

10 nucleotides

Bulged bases

6OLI|1|t|A|2407

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLI|1|t|U|2394
6OLI|1|t|G|2395
6OLI|1|t|A|2396
6OLI|1|t|A|2397
6OLI|1|t|C|2398
6OLI|1|t|A|2399
*
6OLI|1|t|U|2405
6OLI|1|t|G|2406
6OLI|1|t|A|2407
6OLI|1|t|A|2408

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain Q

60S ribosomal protein L17

Chain S

60S ribosomal protein L19

Chain m

60S ribosomal protein L39

Chain y

Nascent chain