IL_6OLI_212

3D structure

PDB id

6OLI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUGAAUG*CGCG

Length

11 nucleotides

Bulged bases

6OLI|1|t|A|3682

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLI|1|t|C|3679
6OLI|1|t|U|3680
6OLI|1|t|G|3681
6OLI|1|t|A|3682
6OLI|1|t|A|3683
6OLI|1|t|U|3684
6OLI|1|t|G|3685
*
6OLI|1|t|C|3710
6OLI|1|t|G|3711
6OLI|1|t|C|3712
6OLI|1|t|G|3713

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain A

60S ribosomal protein L8

Chain S2

Small subunit ribosomal RNA; SSU rRNA

Chain v

Transfer RNA; tRNA