IL_6OLI_222

3D structure

PDB id

6OLI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGCGAGCCC*GGGCUCUC

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLI|1|t|G|4064
6OLI|1|t|G|4065
6OLI|1|t|C|4066
6OLI|1|t|G|4067
6OLI|1|t|A|4068
6OLI|1|t|G|4069
6OLI|1|t|C|4070
6OLI|1|t|C|4071
6OLI|1|t|C|4072
*
6OLI|1|t|G|4076
6OLI|1|t|G|4077
6OLI|1|t|G|4078
6OLI|1|t|C|4079
6OLI|1|t|U|4080
6OLI|1|t|C|4081
6OLI|1|t|U|4082
6OLI|1|t|C|4083

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain A

60S ribosomal protein L8

Chain I

60S ribosomal protein L7a

Chain SB

40S ribosomal protein S3a

Chain h

60S ribosomal protein L34