IL_6OLI_286
3D structure
- PDB id
- 6OLI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GGAAGUCGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- 6OLI|1|t|G|3810
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLI_286 not in the Motif Atlas
- Homologous match to IL_8C3A_484
- Geometric discrepancy: 0.092
- The information below is about IL_8C3A_484
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04332.2
- Basepair signature
- cWW-cWW-L-cWW-L-R-L-R-L-L
- Number of instances in this motif group
- 3
Unit IDs
6OLI|1|t|G|2826
6OLI|1|t|G|2827
6OLI|1|t|A|2828
6OLI|1|t|A|2829
6OLI|1|t|G|2830
6OLI|1|t|U|2831
6OLI|1|t|C|2832
6OLI|1|t|G|2833
6OLI|1|t|G|2834
*
6OLI|1|t|C|3808
6OLI|1|t|U|3809
6OLI|1|t|G|3810
6OLI|1|t|U|3811
6OLI|1|t|C|3812
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain W
- 60S ribosomal protein L23
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