IL_6OLI_288
3D structure
- PDB id
- 6OLI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UAA*UCGA
- Length
- 7 nucleotides
- Bulged bases
- 6OLI|1|D|G|94
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLI_288 not in the Motif Atlas
- Homologous match to IL_8P9A_371
- Geometric discrepancy: 0.1933
- The information below is about IL_8P9A_371
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_76400.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
6OLI|1|D|U|64
6OLI|1|D|A|65
6OLI|1|D|A|66
*
6OLI|1|D|U|92
6OLI|1|D|C|93
6OLI|1|D|G|94
6OLI|1|D|A|95
Current chains
- Chain D
- 5.8S ribosomal RNA
Nearby chains
- Chain Z
- 60S ribosomal protein L26
- Chain i
- 60S ribosomal protein L35
- Chain k
- 60S ribosomal protein L37
- Chain t
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: