IL_6OLZ_004
3D structure
- PDB id
- 6OLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CUGAAUUU*AUUAGUCAG
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLZ_004 not in the Motif Atlas
- Geometric match to IL_5TBW_005
- Geometric discrepancy: 0.1517
- The information below is about IL_5TBW_005
- Detailed Annotation
- tSH-tHW-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_35728.2
- Basepair signature
- cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
6OLZ|1|A2|C|30
6OLZ|1|A2|U|31
6OLZ|1|A2|G|32
6OLZ|1|A2|A|33
6OLZ|1|A2|A|34
6OLZ|1|A2|U|35
6OLZ|1|A2|U|36
6OLZ|1|A2|U|37
*
6OLZ|1|A2|A|44
6OLZ|1|A2|U|45
6OLZ|1|A2|U|46
6OLZ|1|A2|A|47
6OLZ|1|A2|G|48
6OLZ|1|A2|U|49
6OLZ|1|A2|C|50
6OLZ|1|A2|A|51
6OLZ|1|A2|G|52
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain AL
- 60S ribosomal protein L13
- Chain AN
- 60S ribosomal protein L15
- Chain Aa
- 60S ribosomal protein L27a
- Chain Aj
- 60S ribosomal protein L37
- Chain Ao
- 60S ribosomal protein L36a
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