IL_6OLZ_038

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GCUGGGAAGG*CAGCAGCACUCGC

Length

23 nucleotides

Bulged bases

6OLZ|1|A2|U|719, 6OLZ|1|A2|G|720, 6OLZ|1|A2|A|922, 6OLZ|1|A2|C|923

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLZ|1|A2|G|717
6OLZ|1|A2|C|718
6OLZ|1|A2|U|719
6OLZ|1|A2|G|720
6OLZ|1|A2|G|721
6OLZ|1|A2|G|722
6OLZ|1|A2|A|723
6OLZ|1|A2|A|724
6OLZ|1|A2|G|725
6OLZ|1|A2|G|726
*
6OLZ|1|A2|C|915
6OLZ|1|A2|A|916
6OLZ|1|A2|G|917
6OLZ|1|A2|C|918
6OLZ|1|A2|A|919
6OLZ|1|A2|G|920
6OLZ|1|A2|C|921
6OLZ|1|A2|A|922
6OLZ|1|A2|C|923
6OLZ|1|A2|U|924
6OLZ|1|A2|C|925
6OLZ|1|A2|G|926
6OLZ|1|A2|C|927

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AC

60S ribosomal protein L4

Chain AF

60S ribosomal protein L7

Chain AM

60S ribosomal protein L14

Chain AS

60S ribosomal protein L18a