IL_6OLZ_076

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UUG*CA

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OLZ_076 not in the Motif Atlas

Geometric match to IL_4YAZ_008

Geometric discrepancy: 0.3098

The information below is about IL_4YAZ_008

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_71421.2

Basepair signature

cWW-cWW

Number of instances in this motif group

35

Unit IDs

6OLZ|1|A2|U|1738
6OLZ|1|A2|U|1739
6OLZ|1|A2|G|1740
*
6OLZ|1|A2|C|1756
6OLZ|1|A2|A|1757

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AD

60S ribosomal protein L5