IL_6OLZ_123

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UAG*UGGG

Length

7 nucleotides

Bulged bases

6OLZ|1|A2|G|4145

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OLZ_123 not in the Motif Atlas

Homologous match to IL_8C3A_100

Geometric discrepancy: 0.1393

The information below is about IL_8C3A_100

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38958.10

Basepair signature

cWW-cWW-cWW-tHS

Number of instances in this motif group

9

Unit IDs

6OLZ|1|A2|U|3898
6OLZ|1|A2|A|3899
6OLZ|1|A2|G|3900
*
6OLZ|1|A2|U|4143
6OLZ|1|A2|G|4144
6OLZ|1|A2|G|4145
6OLZ|1|A2|G|4146

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AA

60S ribosomal protein L8

Chain AN

60S ribosomal protein L15

Chain Ao

60S ribosomal protein L36a