IL_6OLZ_141

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CU*AACG

Length

6 nucleotides

Bulged bases

6OLZ|1|A2|A|4480, 6OLZ|1|A2|C|4481

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OLZ_141 not in the Motif Atlas

Homologous match to IL_8C3A_117

Geometric discrepancy: 0.1907

The information below is about IL_8C3A_117

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_24807.2

Basepair signature

cWW-cWW

Number of instances in this motif group

16

Unit IDs

6OLZ|1|A2|C|4420
6OLZ|1|A2|U|4421
*
6OLZ|1|A2|A|4479
6OLZ|1|A2|A|4480
6OLZ|1|A2|C|4481
6OLZ|1|A2|G|4482

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AB

60S ribosomal protein L3

Chain AO

60S ribosomal protein L13a

Chain AV

60S ribosomal protein L23