IL_6OLZ_145

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CG*CAG

Length

5 nucleotides

Bulged bases

6OLZ|1|A2|A|4510

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OLZ_145 not in the Motif Atlas

Geometric match to IL_1U9S_001

Geometric discrepancy: 0.2672

The information below is about IL_1U9S_001

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

160

Unit IDs

6OLZ|1|A2|C|4499
6OLZ|1|A2|G|4500
*
6OLZ|1|A2|C|4509
6OLZ|1|A2|A|4510
6OLZ|1|A2|G|4511

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AA

60S ribosomal protein L8

Chain AI

60S ribosomal protein L10

Chain Bv

Transfer RNA; tRNA