IL_6OLZ_201

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUC*GC

Length

5 nucleotides

Bulged bases

6OLZ|1|B1|U|607

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OLZ_201 not in the Motif Atlas

Geometric match to IL_4V88_407

Geometric discrepancy: 0.3145

The information below is about IL_4V88_407

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_83039.19

Basepair signature

cWW-L-cWW

Number of instances in this motif group

123

Unit IDs

6OLZ|1|B1|G|606
6OLZ|1|B1|U|607
6OLZ|1|B1|C|608
*
6OLZ|1|B1|G|635
6OLZ|1|B1|C|636

Current chains

Chain B1

18S ribosomal RNA

Nearby chains

Chain BD

40S ribosomal protein S3

Chain Be

40S ribosomal protein S30

Chain Bx

mRNA