IL_6OLZ_211

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CGC*GAGG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OLZ_211 not in the Motif Atlas

Geometric match to IL_4V87_185

Geometric discrepancy: 0.313

The information below is about IL_4V87_185

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_09990.3

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

3

Unit IDs

6OLZ|1|B1|C|877
6OLZ|1|B1|G|878
6OLZ|1|B1|C|879
*
6OLZ|1|B1|G|907
6OLZ|1|B1|A|908
6OLZ|1|B1|G|909
6OLZ|1|B1|G|910

Current chains

Chain B1

18S ribosomal RNA

Nearby chains

Chain AR

60S ribosomal protein L19

Chain BH

40S ribosomal protein S7