IL_6OLZ_216
3D structure
- PDB id
- 6OLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGUAU*AGACG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLZ_216 not in the Motif Atlas
- Geometric match to IL_4LFB_065
- Geometric discrepancy: 0.2583
- The information below is about IL_4LFB_065
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71154.2
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
6OLZ|1|B1|C|941
6OLZ|1|B1|G|942
6OLZ|1|B1|U|943
6OLZ|1|B1|A|944
6OLZ|1|B1|U|945
*
6OLZ|1|B1|A|981
6OLZ|1|B1|G|982
6OLZ|1|B1|A|983
6OLZ|1|B1|C|984
6OLZ|1|B1|G|985
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain AA
- 60S ribosomal protein L8
- Chain BB
- 40S ribosomal protein S3a
- Chain BO
- 40S ribosomal protein S14
- Chain Ba
- 40S ribosomal protein S26
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