IL_6OLZ_258

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCC*GAGCG

Length

8 nucleotides

Bulged bases

6OLZ|1|B1|C|1783

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OLZ_258 not in the Motif Atlas

Geometric match to IL_8P9A_292

Geometric discrepancy: 0.3995

The information below is about IL_8P9A_292

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15698.5

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

11

Unit IDs

6OLZ|1|B1|C|1750
6OLZ|1|B1|C|1751
6OLZ|1|B1|C|1752
*
6OLZ|1|B1|G|1780
6OLZ|1|B1|A|1781
6OLZ|1|B1|G|1782
6OLZ|1|B1|C|1783
6OLZ|1|B1|G|1784

Current chains

Chain B1

18S ribosomal RNA

Nearby chains

Chain AW

60S ribosomal protein L24

Chain BG

40S ribosomal protein S6