IL_6OLZ_273

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CGC*GG

Length

5 nucleotides

Bulged bases

6OLZ|1|A2|G|1797

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OLZ_273 not in the Motif Atlas

Homologous match to IL_8P9A_273

Geometric discrepancy: 0.2481

The information below is about IL_8P9A_273

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

160

Unit IDs

6OLZ|1|A2|C|1796
6OLZ|1|A2|G|1797
6OLZ|1|A2|C|1798
*
6OLZ|1|A2|G|1805
6OLZ|1|A2|G|1806

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AD

60S ribosomal protein L5

Chain AT

60S ribosomal protein L21

Chain Ab

60S ribosomal protein L29