3D structure

PDB id
6OLZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
GCUCAGCGUG*CCGUUGAACCC
Length
21 nucleotides
Bulged bases
6OLZ|1|B1|U|1585, 6OLZ|1|B1|G|1587
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OLZ|1|B1|G|1541
6OLZ|1|B1|C|1542
6OLZ|1|B1|U|1543
6OLZ|1|B1|C|1544
6OLZ|1|B1|A|1545
6OLZ|1|B1|G|1546
6OLZ|1|B1|C|1547
6OLZ|1|B1|G|1548
6OLZ|1|B1|U|1549
6OLZ|1|B1|G|1550
*
6OLZ|1|B1|C|1582
6OLZ|1|B1|C|1583
6OLZ|1|B1|G|1584
6OLZ|1|B1|U|1585
6OLZ|1|B1|U|1586
6OLZ|1|B1|G|1587
6OLZ|1|B1|A|1588
6OLZ|1|B1|A|1589
6OLZ|1|B1|C|1590
6OLZ|1|B1|C|1591
6OLZ|1|B1|C|1592

Current chains

Chain B1
18S ribosomal RNA

Nearby chains

Chain BD
40S ribosomal protein S3
Chain BF
40S ribosomal protein S5
Chain BQ
40S ribosomal protein S16
Chain BT
40S ribosomal protein S19
Chain BU
40S ribosomal protein S20
Chain BZ
40S ribosomal protein S25
Chain Bd
40S ribosomal protein S29

Coloring options:

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