IL_6OLZ_315
3D structure
- PDB id
- 6OLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GCCCC*GGCGC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLZ_315 not in the Motif Atlas
- Geometric match to IL_6CZR_167
- Geometric discrepancy: 0.3702
- The information below is about IL_6CZR_167
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_49751.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 18
Unit IDs
6OLZ|1|A2|G|127
6OLZ|1|A2|C|128
6OLZ|1|A2|C|129
6OLZ|1|A2|C|130
6OLZ|1|A2|C|131
*
6OLZ|1|A2|G|136
6OLZ|1|A2|G|137
6OLZ|1|A2|C|138
6OLZ|1|A2|G|139
6OLZ|1|A2|C|140
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain AG
- 60S ribosomal protein L7a
- Chain AN
- 60S ribosomal protein L15
- Chain AX
- 60S ribosomal protein L23a
- Chain Ah
- 60S ribosomal protein L35
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