IL_6OM0_091
3D structure
- PDB id
- 6OM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- G(OMC)CC*G(UR3)A(6MZ)C
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMC, UR3, 6MZ
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OM0_091 not in the Motif Atlas
- Homologous match to IL_8P9A_453
- Geometric discrepancy: 0.1247
- The information below is about IL_8P9A_453
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_25873.2
- Basepair signature
- cWW-cSH-cWS-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
6OM0|1|S2|G|1702
6OM0|1|S2|OMC|1703
6OM0|1|S2|C|1704
6OM0|1|S2|C|1705
*
6OM0|1|S2|G|1829
6OM0|1|S2|UR3|1830
6OM0|1|S2|A|1831
6OM0|1|S2|6MZ|1832
6OM0|1|S2|C|1833
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain o
- 60S ribosomal protein L41
- Chain t
- Large subunit ribosomal RNA; LSU rRNA
- Chain v
- Transfer RNA; tRNA
- Chain w
- mRNA
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