IL_6OM0_095

3D structure

PDB id

6OM0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGAUUGG*UCUAGAG

Length

14 nucleotides

Bulged bases

6OM0|1|S2|U|1721, 6OM0|1|S2|A|1815

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OM0|1|S2|C|1717
6OM0|1|S2|G|1718
6OM0|1|S2|A|1719
6OM0|1|S2|U|1720
6OM0|1|S2|U|1721
6OM0|1|S2|G|1722
6OM0|1|S2|G|1723
*
6OM0|1|S2|U|1810
6OM0|1|S2|C|1811
6OM0|1|S2|U|1812
6OM0|1|S2|A|1813
6OM0|1|S2|G|1814
6OM0|1|S2|A|1815
6OM0|1|S2|G|1816

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SX

40S ribosomal protein S23

Chain W

60S ribosomal protein L23

Chain o

60S ribosomal protein L41

Chain t

Large subunit ribosomal RNA; LSU rRNA