IL_6OM0_255

3D structure

PDB id

6OM0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UAUGGU(OMU)*GAACG

Length

12 nucleotides

Bulged bases

6OM0|1|S2|G|113, 6OM0|1|S2|G|114

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OM0|1|S2|U|110
6OM0|1|S2|A|111
6OM0|1|S2|U|112
6OM0|1|S2|G|113
6OM0|1|S2|G|114
6OM0|1|S2|U|115
6OM0|1|S2|OMU|116
*
6OM0|1|S2|G|347
6OM0|1|S2|A|348
6OM0|1|S2|A|349
6OM0|1|S2|C|350
6OM0|1|S2|G|351

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SE

40S ribosomal protein S4, X isoform

Chain SI

40S ribosomal protein S8

Chain SL

40S ribosomal protein S11