IL_6OM0_278

3D structure

PDB id

6OM0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGCCG*CCGGCGAC

Length

13 nucleotides

Bulged bases

6OM0|1|t|C|660

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OM0|1|t|G|481
6OM0|1|t|G|482
6OM0|1|t|C|483
6OM0|1|t|C|484
6OM0|1|t|G|485
*
6OM0|1|t|C|656
6OM0|1|t|C|657
6OM0|1|t|G|658
6OM0|1|t|G|659
6OM0|1|t|C|660
6OM0|1|t|G|661
6OM0|1|t|A|662
6OM0|1|t|C|663

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain C

60S ribosomal protein L4

Chain r

60S ribosomal protein L28