IL_6OM6_043

3D structure

PDB id

6OM6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CCCAGACAGCC*GGUCGAG

Length

18 nucleotides

Bulged bases

6OM6|1|1|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OM6|1|1|C|1043
6OM6|1|1|C|1044
6OM6|1|1|C|1045
6OM6|1|1|A|1046
6OM6|1|1|G|1047
6OM6|1|1|A|1048
6OM6|1|1|C|1049
6OM6|1|1|A|1050
6OM6|1|1|G|1051
6OM6|1|1|C|1052
6OM6|1|1|C|1053
*
6OM6|1|1|G|1106
6OM6|1|1|G|1107
6OM6|1|1|U|1108
6OM6|1|1|C|1109
6OM6|1|1|G|1110
6OM6|1|1|A|1111
6OM6|1|1|G|1112

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain F

50S ribosomal protein L6

Chain f

50S ribosomal protein L36