IL_6OM6_046

3D structure

PDB id

6OM6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGUUC*GAAGUG

Length

11 nucleotides

Bulged bases

6OM6|1|1|G|1248

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OM6|1|1|C|1196
6OM6|1|1|G|1197
6OM6|1|1|U|1198
6OM6|1|1|U|1199
6OM6|1|1|C|1200
*
6OM6|1|1|G|1245
6OM6|1|1|A|1246
6OM6|1|1|A|1247
6OM6|1|1|G|1248
6OM6|1|1|U|1249
6OM6|1|1|G|1250

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L4

Chain L

50S ribosomal protein L15

Chain Q

50S ribosomal protein L20