IL_6OM6_118
3D structure
- PDB id
- 6OM6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAA*UG
- Length
- 6 nucleotides
- Bulged bases
- 6OM6|1|2|G|64, 6OM6|1|2|A|65
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OM6_118 not in the Motif Atlas
- Homologous match to IL_4LFB_005
- Geometric discrepancy: 0.108
- The information below is about IL_4LFB_005
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_71421.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 27
Unit IDs
6OM6|1|2|C|63
6OM6|1|2|G|64
6OM6|1|2|A|65
6OM6|1|2|A|66
*
6OM6|1|2|U|103
6OM6|1|2|G|104
Current chains
- Chain 2
- 16S ribosomal RNA
Nearby chains
- Chain y
- 30S ribosomal protein S20
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