IL_6OM6_192

3D structure

PDB id

6OM6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGGAG*CGACCUUGAAAUACC

Length

20 nucleotides

Bulged bases

6OM6|1|1|A|2163, 6OM6|1|1|C|2164, 6OM6|1|1|U|2172

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OM6|1|1|G|2123
6OM6|1|1|G|2124
6OM6|1|1|G|2125
6OM6|1|1|A|2126
6OM6|1|1|G|2127
*
6OM6|1|1|C|2161
6OM6|1|1|G|2162
6OM6|1|1|A|2163
6OM6|1|1|C|2164
6OM6|1|1|C|2165
6OM6|1|1|U|2166
6OM6|1|1|U|2167
6OM6|1|1|G|2168
6OM6|1|1|A|2169
6OM6|1|1|A|2170
6OM6|1|1|A|2171
6OM6|1|1|U|2172
6OM6|1|1|A|2173
6OM6|1|1|C|2174
6OM6|1|1|C|2175

Current chains

Chain 1

23S ribosomal RNA

Nearby chains