3D structure

PDB id
6OM6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
GAAC*GGAGUGAAAAAGAAC
Length
19 nucleotides
Bulged bases
6OM6|1|1|A|504, 6OM6|1|1|A|508
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OM6|1|1|G|481
6OM6|1|1|A|482
6OM6|1|1|A|483
6OM6|1|1|C|484
*
6OM6|1|1|G|495
6OM6|1|1|G|496
6OM6|1|1|A|497
6OM6|1|1|G|498
6OM6|1|1|U|499
6OM6|1|1|G|500
6OM6|1|1|A|501
6OM6|1|1|A|502
6OM6|1|1|A|503
6OM6|1|1|A|504
6OM6|1|1|A|505
6OM6|1|1|G|506
6OM6|1|1|A|507
6OM6|1|1|A|508
6OM6|1|1|C|509

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain S
50S ribosomal protein L22
Chain U
50S ribosomal protein L24

Coloring options:

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