IL_6OPE_003
3D structure
- PDB id
- 6OPE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CCUAAG*UAG
- Length
- 9 nucleotides
- Bulged bases
- 6OPE|1|QA|C|48, 6OPE|1|QA|A|51
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OPE_003 not in the Motif Atlas
- Geometric match to IL_4LFB_003
- Geometric discrepancy: 0.0706
- The information below is about IL_4LFB_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14177.2
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6OPE|1|QA|C|47
6OPE|1|QA|C|48
6OPE|1|QA|U|49
6OPE|1|QA|A|50
6OPE|1|QA|A|51
6OPE|1|QA|G|52
*
6OPE|1|QA|U|359
6OPE|1|QA|A|360
6OPE|1|QA|G|361
Current chains
- Chain QA
- 16S rRNA
Nearby chains
- Chain QL
- 30S ribosomal protein S12
- Chain YI
- 50S ribosomal protein L9
Coloring options: