3D structure

PDB id
6OPE (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.1 Å

Loop

Sequence
CUGAC*GGUG
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6OPE_086 not in the Motif Atlas
Geometric match to IL_7RQB_026
Geometric discrepancy: 0.1289
The information below is about IL_7RQB_026
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_94165.1
Basepair signature
cWW-L-R-L-tHS-cWW
Number of instances in this motif group
1

Unit IDs

6OPE|1|RA|C|846
6OPE|1|RA|U|847
6OPE|1|RA|G|848
6OPE|1|RA|A|849
6OPE|1|RA|C|850
*
6OPE|1|RA|G|928
6OPE|1|RA|G|929
6OPE|1|RA|U|930
6OPE|1|RA|G|931

Current chains

Chain RA
23S rRNA

Nearby chains

Chain R3
50S ribosomal protein L30

Coloring options:


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