IL_6OPE_187
3D structure
- PDB id
- 6OPE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGAAGAAG*UGUAAAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OPE_187 not in the Motif Atlas
- Homologous match to IL_4LFB_017
- Geometric discrepancy: 0.1023
- The information below is about IL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28026.3
- Basepair signature
- cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW
- Number of instances in this motif group
- 2
Unit IDs
6OPE|1|XA|G|409
6OPE|1|XA|G|410
6OPE|1|XA|A|411
6OPE|1|XA|A|412
6OPE|1|XA|G|413
6OPE|1|XA|A|414
6OPE|1|XA|A|415
6OPE|1|XA|G|416
*
6OPE|1|XA|U|427
6OPE|1|XA|G|428
6OPE|1|XA|U|429
6OPE|1|XA|A|430
6OPE|1|XA|A|431
6OPE|1|XA|A|432
6OPE|1|XA|C|433
Current chains
- Chain XA
- 16S rRNA
Nearby chains
- Chain XD
- 30S ribosomal protein S4
Coloring options: