IL_6OPE_228
3D structure
- PDB id
- 6OPE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAAG*CGAG
- Length
- 9 nucleotides
- Bulged bases (A, C, G, U)
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OPE_228 not in the Motif Atlas
- Geometric match to IL_4LFB_062
- Geometric discrepancy: 0.1083
- The information below is about IL_4LFB_062
- Detailed Annotation
- UAA/GAN variation
- Broad Annotation
- UAA/GAN variation
- Motif group
- IL_07235.2
- Basepair signature
- cWW-tSH-L-tHS-cWW
- Number of instances in this motif group
- 9
Unit IDs
6OPE|1|XA|C|1431
6OPE|1|XA|G|1432
6OPE|1|XA|A|1433
6OPE|1|XA|A|1434
6OPE|1|XA|G|1435
*
6OPE|1|XA|C|1466
6OPE|1|XA|G|1467
6OPE|1|XA|A|1468
6OPE|1|XA|G|1469
Current chains
- Chain XA
- 16S rRNA
Nearby chains
- Chain XT
- 30S ribosomal protein S20
- Chain YA
- Large subunit ribosomal RNA; LSU rRNA
- Chain YT
- 50S ribosomal protein L19
Coloring options: