IL_6OPE_338
3D structure
- PDB id
- 6OPE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGAACC*GAAAC
- Length
- 11 nucleotides
- Bulged bases (A, C, G, U)
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OPE_338 not in the Motif Atlas
- Homologous match to IL_7RQB_112
- Geometric discrepancy: 0.102
- The information below is about IL_7RQB_112
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OPE|1|YB|G|23
6OPE|1|YB|G|24
6OPE|1|YB|A|25
6OPE|1|YB|A|26
6OPE|1|YB|C|27
6OPE|1|YB|C|28
*
6OPE|1|YB|G|56
6OPE|1|YB|A|57
6OPE|1|YB|A|58
6OPE|1|YB|A|59
6OPE|1|YB|C|60
Current chains
- Chain YB
- 5S rRNA
Nearby chains
- Chain YG
- 50S ribosomal protein L5
- Chain YS
- 50S ribosomal protein L18
Coloring options: