IL_6OPE_356

3D structure

PDB id

6OPE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CACGGCGUCAAGCCGGUAAG*CGAGG

Length

25 nucleotides

Bulged bases

6OPE|1|RA|A|2790, 6OPE|1|RA|U|2797

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OPE|1|RA|C|2789
6OPE|1|RA|A|2790
6OPE|1|RA|C|2791
6OPE|1|RA|G|2792
6OPE|1|RA|G|2793
6OPE|1|RA|C|2794
6OPE|1|RA|G|2795
6OPE|1|RA|U|2797
6OPE|1|RA|C|2798
6OPE|1|RA|A|2799
6OPE|1|RA|A|2801
6OPE|1|RA|G|2802
6OPE|1|RA|C|2803
6OPE|1|RA|C|2804
6OPE|1|RA|G|2805
6OPE|1|RA|G|2807
6OPE|1|RA|U|2808
6OPE|1|RA|A|2809
6OPE|1|RA|A|2810
6OPE|1|RA|G|2811
*
6OPE|1|RA|C|2889
6OPE|1|RA|G|2891
6OPE|1|RA|A|2892
6OPE|1|RA|G|2893
6OPE|1|RA|G|2894

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RE

50S ribosomal protein L3

Chain RW

50S ribosomal protein L22