IL_6ORD_144

3D structure

PDB id

6ORD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GCGUAGGAUAG*CC

Length

13 nucleotides

Bulged bases

6ORD|1|RA|G|2116

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ORD_144 not in the Motif Atlas

Homologous match to IL_7RQB_085

Geometric discrepancy: 0.3409

The information below is about IL_7RQB_085

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ORD|1|RA|G|2110
6ORD|1|RA|C|2111
6ORD|1|RA|G|2112
6ORD|1|RA|U|2113
6ORD|1|RA|A|2114
6ORD|1|RA|G|2115
6ORD|1|RA|G|2116
6ORD|1|RA|A|2117
6ORD|1|RA|U|2118
6ORD|1|RA|A|2119
6ORD|1|RA|G|2120
*
6ORD|1|RA|C|2178
6ORD|1|RA|C|2179

Current chains

Chain RA

23S rRNA

Nearby chains