IL_6ORD_150

3D structure

PDB id

6ORD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

AG*CCU

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ORD_150 not in the Motif Atlas

Homologous match to IL_7RQB_091

Geometric discrepancy: 0.1003

The information below is about IL_7RQB_091

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_76488.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

36

Unit IDs

6ORD|1|RA|A|2453
6ORD|1|RA|G|2454
*
6ORD|1|RA|C|2498
6ORD|1|RA|C|2499
6ORD|1|RA|U|2500

Current chains

Chain RA

23S rRNA

Nearby chains

Chain QY

Transfer RNA; tRNA

Chain RE

50S ribosomal protein L3