IL_6ORD_253

3D structure

PDB id

6ORD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GU*GGC

Length

5 nucleotides

Bulged bases

6ORD|1|YA|G|729

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ORD_253 not in the Motif Atlas

Homologous match to IL_7RQB_020

Geometric discrepancy: 0.1049

The information below is about IL_7RQB_020

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

42

Unit IDs

6ORD|1|YA|G|702
6ORD|1|YA|U|703
*
6ORD|1|YA|G|728
6ORD|1|YA|G|729
6ORD|1|YA|C|730

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YD

50S ribosomal protein L2