IL_6ORL_023

3D structure

PDB id

6ORL (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 pre-accommodated 70S complex at 24 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AAUU*AU

Length

6 nucleotides

Bulged bases

6ORL|1|1|U|846

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ORL_023 not in the Motif Atlas

Geometric match to IL_7A0S_024

Geometric discrepancy: 0.388

The information below is about IL_7A0S_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_90729.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

30

Unit IDs

6ORL|1|1|A|844
6ORL|1|1|A|845
6ORL|1|1|U|846
6ORL|1|1|U|847
*
6ORL|1|1|A|933
6ORL|1|1|U|934

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain Z

50S ribosomal protein L30