3D structure

PDB id
6ORL (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF1 pre-accommodated 70S complex at 24 ms
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
GUAAG*UAUC
Length
9 nucleotides
Bulged bases
6ORL|1|1|A|1205
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6ORL_041 not in the Motif Atlas
Homologous match to IL_5J7L_287
Geometric discrepancy: 0.084
The information below is about IL_5J7L_287
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_91920.1
Basepair signature
cWW-cWW-tHH-cWW
Number of instances in this motif group
1

Unit IDs

6ORL|1|1|G|1202
6ORL|1|1|U|1203
6ORL|1|1|A|1204
6ORL|1|1|A|1205
6ORL|1|1|G|1206
*
6ORL|1|1|U|1240
6ORL|1|1|A|1241
6ORL|1|1|U|1242
6ORL|1|1|C|1243

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain D
50S ribosomal protein L4
Chain L
50S ribosomal protein L15

Coloring options:


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