IL_6ORL_053

3D structure

PDB id

6ORL (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 pre-accommodated 70S complex at 24 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGUAGG*CUGAGG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ORL_053 not in the Motif Atlas

Geometric match to IL_8ZA4_003

Geometric discrepancy: 0.3853

The information below is about IL_8ZA4_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_35186.1

Basepair signature

cWW-L-R-L-R-L-R-cWW-cWW

Number of instances in this motif group

4

Unit IDs

6ORL|1|1|U|1474
6ORL|1|1|G|1475
6ORL|1|1|U|1476
6ORL|1|1|A|1477
6ORL|1|1|G|1478
6ORL|1|1|G|1479
*
6ORL|1|1|C|1512
6ORL|1|1|U|1513
6ORL|1|1|G|1514
6ORL|1|1|A|1515
6ORL|1|1|G|1516
6ORL|1|1|G|1517

Current chains

Chain 1

23S ribosomal RNA

Nearby chains