IL_6ORL_134

3D structure

PDB id

6ORL (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 pre-accommodated 70S complex at 24 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUC*GAAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ORL_134 not in the Motif Atlas

Geometric match to IL_4N0T_004

Geometric discrepancy: 0.3245

The information below is about IL_4N0T_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_32983.2

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

8

Unit IDs

6ORL|1|2|C|658
6ORL|1|2|U|659
6ORL|1|2|C|660
*
6ORL|1|2|G|745
6ORL|1|2|A|746
6ORL|1|2|A|747
6ORL|1|2|G|748

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain t

30S ribosomal protein S15