IL_6ORL_148

3D structure

PDB id

6ORL (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 pre-accommodated 70S complex at 24 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGAAGUUUU*AGAAUGUGCCUUCGGGAACC

Length

29 nucleotides

Bulged bases

6ORL|1|2|U|1030

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ORL|1|2|G|1002
6ORL|1|2|G|1003
6ORL|1|2|A|1004
6ORL|1|2|A|1005
6ORL|1|2|G|1006
6ORL|1|2|U|1007
6ORL|1|2|U|1008
6ORL|1|2|U|1009
6ORL|1|2|U|1010
*
6ORL|1|2|A|1019
6ORL|1|2|G|1020
6ORL|1|2|A|1021
6ORL|1|2|A|1022
6ORL|1|2|U|1023
6ORL|1|2|G|1024
6ORL|1|2|U|1025
6ORL|1|2|G|1026
6ORL|1|2|C|1027
6ORL|1|2|C|1028
6ORL|1|2|U|1029
6ORL|1|2|U|1030
6ORL|1|2|C|1031
6ORL|1|2|G|1032
6ORL|1|2|G|1033
6ORL|1|2|G|1034
6ORL|1|2|A|1035
6ORL|1|2|A|1036
6ORL|1|2|C|1037
6ORL|1|2|C|1038

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain s

30S ribosomal protein S14